C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain and coiled-coil containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121142 R3hcc1-002 ENSMUSG00000034194 10090 - 14:69697308-69707493 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000121142
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000121142 3.982±1.12 4.461±0.62 5.742±0.00 3.015±0.22 2.293±0.21 2.375±0.18 2.383±0.46 1.360±0.38 3.232±0.21 2.087±0.78 5.599±1.74 1.537±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YD CIL_0007YD_0002 VISTA 14:69222690-69823937
CIL_0008FQ CIL_0008FQ_0002 VISTA 14:69236074-69837250

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265806 R3HCC1-003 protein_coding Homo_sapiens 0 531
ENST00000411463 R3HCC1-201 protein_coding Homo_sapiens 0 531
ENST00000517633 R3HCC1-009 processed_transcript Homo_sapiens 2.99878e-43 178
ENST00000518454 R3HCC1-002 protein_coding Homo_sapiens 0 398
ENST00000518840 R3HCC1-004 protein_coding Homo_sapiens 0 531
ENST00000519952 R3HCC1-006 protein_coding Homo_sapiens 5e-36 156
ENST00000521588 R3HCC1-005 protein_coding Homo_sapiens 0 551
ENST00000522012 R3HCC1-001 processed_transcript Homo_sapiens 0 531

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