C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 7860
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121190 Gm7860-001 ENSMUSG00000082535 10090 - 16:91539182-91540060 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121190
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121190 0.215±0.17 0.110±0.07 0.628±0.51 0.143±0.13 0.761±0.56 0.248±0.07 0.262±0.09 0.162±0.08 0.332±0.40 0.171±0.04 0.099±0.00 0.212±0.19 0.075±0.05 0.060±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UY CIL_0007UY_0002 VISTA 16:90990868-91593443
CIL_0003WY CIL_0003WY_0002 CGP 16:91485238-91565169

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314255 RPS2P28-001 processed_pseudogene Homo_sapiens 0 697
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 689
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 684
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 682
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 586
ENST00000438210 RP3-342P20.2-001 processed_pseudogene Homo_sapiens 0 725
ENST00000439199 RPS2P32-001 processed_pseudogene Homo_sapiens 0 643
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 597
ENST00000447420 RP4-803A2.2-001 unprocessed_pseudogene Homo_sapiens 0 556
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 462
ENST00000448547 AC007279.2-001 processed_pseudogene Homo_sapiens 0 577
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 601
ENST00000469997 RPS2P45-002 processed_transcript Homo_sapiens 0 381
ENST00000478174 CTD-2375G15.1-001 processed_pseudogene Homo_sapiens 0 628
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 673
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 780
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 686
ENST00000490535 RPS2P45-001 transcribed_processed_pseudogene Homo_sapiens 0 472
ENST00000494599 RPS2P24-001 processed_pseudogene Homo_sapiens 0 665
ENST00000498401 RP11-270M14.1-001 transcribed_processed_pseudogene Homo_sapiens 0 228

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