C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | predicted pseudogene 6985 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000121255  |
Gm6985-001 |
ENSMUSG00000087255 |
10090 | + |
X:93638614-93638884  |
processed_pseudogene |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008W8 | CIL_0008W8_0002 | VISTA | X:93076664-93678616 |
| CIL_0008NM | CIL_0008NM_0002 | VISTA | X:93107742-93710584 |
| CIL_0008NL | CIL_0008NL_0002 | VISTA | X:93128674-93730367 |
| CIL_0008NF | CIL_0008NF_0002 | VISTA | X:93157367-93758875 |
| CIL_0008NE | CIL_0008NE_0002 | VISTA | X:93196691-93798662 |
| CIL_00084H | CIL_00084H_0002 | VISTA | X:93277817-93878339 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000261249
|
TRMT5-001 | protein_coding | Homo_sapiens | 0 | 207 |
|
ENST00000313559
|
HMGN2P46-004 | processed_transcript | Homo_sapiens | 0 | 244 |
|
ENST00000361427
|
HMGN2-001 | protein_coding | Homo_sapiens | 0 | 320 |
|
ENST00000396644
|
HMGN2P46-003 | processed_transcript | Homo_sapiens | 0 | 244 |
|
ENST00000396645
|
HMGN2P46-005 | processed_transcript | Homo_sapiens | 0 | 244 |
|
ENST00000409454
|
HMGN2P46-002 | processed_transcript | Homo_sapiens | 0 | 244 |
|
ENST00000421698
|
RP11-741G21.1-001 | processed_pseudogene | Homo_sapiens | 0 | 268 |
|
ENST00000425149
|
HMGN2P19-001 | processed_pseudogene | Homo_sapiens | 0 | 257 |
|
ENST00000427588
|
HMGN2P22-001 | processed_pseudogene | Homo_sapiens | 0 | 217 |
|
ENST00000433516
|
HMGN2P24-001 | processed_pseudogene | Homo_sapiens | 0 | 305 |
|
ENST00000433603
|
HMGN2P3-001 | processed_pseudogene | Homo_sapiens | 0 | 318 |
|
ENST00000436882
|
HMGN2P5-001 | processed_pseudogene | Homo_sapiens | 0 | 324 |
|
ENST00000447764
|
HMGN2P21-001 | processed_pseudogene | Homo_sapiens | 0 | 226 |
|
ENST00000448085
|
HMGN2P10-001 | processed_pseudogene | Homo_sapiens | 0 | 261 |
|
ENST00000450680
|
HMGN2P18-001 | processed_pseudogene | Homo_sapiens | 0 | 281 |
|
ENST00000456186
|
HMGN2P7-001 | processed_pseudogene | Homo_sapiens | 0 | 302 |
|
ENST00000460563
|
HMGN2-004 | processed_transcript | Homo_sapiens | 0 | 239 |
|
ENST00000463817
|
HMGN2-006 | processed_transcript | Homo_sapiens | 0 | 254 |
|
ENST00000464888
|
HMGN2-005 | processed_transcript | Homo_sapiens | 0 | 255 |
|
ENST00000466194
|
HMGN2-009 | processed_transcript | Homo_sapiens | 0 | 302 |
|
ENST00000467700
|
HMGN2-007 | processed_transcript | Homo_sapiens | 0 | 239 |
|
ENST00000476875
|
HMGN2P9-001 | processed_pseudogene | Homo_sapiens | 0 | 224 |
|
ENST00000479815
|
HMGN2-003 | processed_transcript | Homo_sapiens | 0 | 239 |
|
ENST00000486956
|
HMGN2P25-001 | processed_pseudogene | Homo_sapiens | 0 | 281 |
|
ENST00000493418
|
HMGN2-008 | processed_transcript | Homo_sapiens | 3.9937e-43 | 180 |
|
ENST00000551091
|
HMGN2P6-001 | processed_pseudogene | Homo_sapiens | 0 | 296 |
|
ENST00000556317
|
RP11-193F5.4-001 | processed_pseudogene | Homo_sapiens | 0 | 206 |
|
ENST00000564594
|
HMGN2P46-007 | processed_transcript | Homo_sapiens | 0 | 195 |
|
ENST00000585707
|
HMGN2P15-001 | processed_pseudogene | Homo_sapiens | 0 | 302 |
|
ENST00000598619
|
HMGN2P46-001 | transcribed_processed_pseudogene | Homo_sapiens | 0 | 244 |
|
ENST00000602394
|
RP11-158D2.1-001 | processed_pseudogene | Homo_sapiens | 0 | 276 |
|
ENST00000606102
|
HMGN2P28-001 | processed_pseudogene | Homo_sapiens | 0 | 226 |
|
ENST00000612378
|
AC243587.1-201 | processed_pseudogene | Homo_sapiens | 0 | 324 |
|
ENST00000619352
|
HMGN2-201 | protein_coding | Homo_sapiens | 0 | 320 |
