C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12936
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121439 Gm12936-001 ENSMUSG00000081319 10090 - 4:126584509-126584809 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLiverOvaryPlacentaENSMUST00000121439
Transcript ID Bladder Brain Breast Liver Ovary Placenta
ENSMUST00000121439 0.065±0.00 0.189±0.02 0.946±0.00 0.535±0.33 0.846±0.42 0.726±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JU CIL_0002JU_0002 CGP 4:126489541-126593903

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298289 RPL36AL-001 protein_coding Homo_sapiens 0 231
ENST00000392994 RPL36A-004 protein_coding Homo_sapiens 0 239
ENST00000399253 RP3-507I15.1-001 processed_pseudogene Homo_sapiens 0 211
ENST00000409170 RPL36A-HNRNPH2-002 protein_coding Homo_sapiens 0 237
ENST00000418637 RP1-128O3.6-001 processed_pseudogene Homo_sapiens 2e-35 152
ENST00000421785 RPL36AP10-001 processed_pseudogene Homo_sapiens 0 211
ENST00000427805 RPL36A-002 protein_coding Homo_sapiens 0 270
ENST00000435130 RP11-84O12.3-001 processed_pseudogene Homo_sapiens 9.99967e-42 172
ENST00000435770 RPL36AP6-001 processed_pseudogene Homo_sapiens 7e-40 167
ENST00000438468 AC004938.5-001 processed_pseudogene Homo_sapiens 0 189
ENST00000441658 RP11-77O7.1-001 processed_pseudogene Homo_sapiens 0 228
ENST00000444514 RPL36AP15-001 processed_pseudogene Homo_sapiens 4e-26 121
ENST00000445859 RPL36AP39-001 processed_pseudogene Homo_sapiens 0 187
ENST00000451203 AC104843.3-001 processed_pseudogene Homo_sapiens 0 219
ENST00000457490 RPL36AP13-001 processed_pseudogene Homo_sapiens 0 206
ENST00000459748 RP11-466H18.1-001 processed_pseudogene Homo_sapiens 0 270
ENST00000465744 RPL36A-010 retained_intron Homo_sapiens 0 267
ENST00000466725 CTC-550B14.1-001 processed_pseudogene Homo_sapiens 2.99878e-43 178
ENST00000471855 RPL36A-001 protein_coding Homo_sapiens 0 267
ENST00000471982 RP11-1085N6.1-001 processed_pseudogene Homo_sapiens 0 193
ENST00000487216 RPL36AP51-001 processed_pseudogene Homo_sapiens 0 211
ENST00000489407 RPL36A-011 retained_intron Homo_sapiens 0 220
ENST00000490372 RPL36AP21-001 processed_pseudogene Homo_sapiens 0 196
ENST00000492041 RP11-85G20.2-001 processed_pseudogene Homo_sapiens 2e-35 152
ENST00000497944 RPL36AP45-001 processed_pseudogene Homo_sapiens 1.96182e-44 182
ENST00000553110 RPL36A-012 protein_coding Homo_sapiens 0 270
ENST00000605745 RP11-108K3.5-001 processed_pseudogene Homo_sapiens 3e-22 106
ENST00000614077 RPL36A-201 protein_coding Homo_sapiens 0 270

Loading