C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12630
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121575 Gm12630-001 ENSMUSG00000082969 10090 - 4:86817794-86818577 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000121575
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000121575 0.598±0.20 0.271±0.07 0.192±0.11 0.445±0.14 0.421±0.18 0.406±0.10 0.249±0.04 0.443±0.20 0.137±0.09 0.363±0.25 0.539±0.16 0.158±0.06 0.237±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DE CIL_0007DE_0002 CGP 4:86648386-86850603
CIL_0007DD CIL_0007DD_0002 CGP 4:86748555-86857412

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393397 AC005042.2-001 processed_pseudogene Homo_sapiens 0 586
ENST00000396414 RP11-242C24.2-001 processed_pseudogene Homo_sapiens 0 547
ENST00000423357 RPL7AP25-001 processed_pseudogene Homo_sapiens 0 446
ENST00000435137 RP11-280O24.3-001 processed_pseudogene Homo_sapiens 0 678
ENST00000441433 RPL7AP38-001 processed_pseudogene Homo_sapiens 0 571
ENST00000470544 RPL7AP31-001 processed_pseudogene Homo_sapiens 0 701
ENST00000476420 RPL7AP56-001 processed_pseudogene Homo_sapiens 0 309
ENST00000483820 RPL7AP4-001 processed_pseudogene Homo_sapiens 0 566
ENST00000486538 RPL7AP11-001 processed_pseudogene Homo_sapiens 0 728
ENST00000496515 RPL7AP2-001 processed_pseudogene Homo_sapiens 0 518
ENST00000541658 RPL7AP3-001 processed_pseudogene Homo_sapiens 0 451
ENST00000588490 RPL7AP66-001 processed_pseudogene Homo_sapiens 0 808

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