C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12912
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121596 Gm12912-001 ENSMUSG00000081067 10090 + 4:75147609-75148989 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyOvaryPlacentaTestisENSMUST00000121596
Transcript ID Adipose Adrenal Breast Heart Kidney Ovary Placenta Testis
ENSMUST00000121596 0.039±0.01 0.086±0.00 0.092±0.04 0.023±0.00 0.031±0.00 0.165±0.06 0.070±0.00 0.040±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001D7 CIL_0001D7_0002 CGP 4:74242497-75278305

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000128726 eef1a1a-001 protein_coding Danio_rerio 0 822
ENSDART00000016121 eef1a1a-002 protein_coding Danio_rerio 0 464
ENST00000309268 EEF1A1-009 protein_coding Homo_sapiens 0 1600
ENST00000316292 EEF1A1-001 protein_coding Homo_sapiens 0 1600
ENST00000325349 EEF1A1P16-001 processed_pseudogene Homo_sapiens 0 1219
ENST00000331523 EEF1A1-004 protein_coding Homo_sapiens 0 1600
ENST00000356303 EEF1A1-015 protein_coding Homo_sapiens 0 508
ENST00000359165 EEF1A1P4-001 processed_pseudogene Homo_sapiens 0 1301
ENST00000395772 EEF1A1P15-001 processed_pseudogene Homo_sapiens 0 549
ENST00000401075 RP11-439L8.2-001 processed_pseudogene Homo_sapiens 0 806
ENST00000415278 EEF1A1P11-001 processed_pseudogene Homo_sapiens 0 1448
ENST00000416082 EEF1A1P29-001 processed_pseudogene Homo_sapiens 0 621
ENST00000417549 EEF1A1P3-001 processed_pseudogene Homo_sapiens 0 1232
ENST00000419025 EEF1A1P8-001 processed_pseudogene Homo_sapiens 0 1314
ENST00000419888 EEF1A1P34-001 processed_pseudogene Homo_sapiens 0 780
ENST00000420064 RP11-175P19.2-001 transcribed_processed_pseudogene Homo_sapiens 0 414
ENST00000421195 EEF1A1P14-001 processed_pseudogene Homo_sapiens 0 1210
ENST00000427807 EEF1A1P36-001 processed_pseudogene Homo_sapiens 0 665
ENST00000429708 EEF1A1P30-001 processed_pseudogene Homo_sapiens 0 913
ENST00000429983 EEF1A1P27-001 processed_pseudogene Homo_sapiens 0 695
ENST00000430498 RP11-104D3.2-001 processed_pseudogene Homo_sapiens 0 974
ENST00000430685 RP11-214N15.5-001 processed_pseudogene Homo_sapiens 0 235
ENST00000434005 EEF1A1P6-001 processed_pseudogene Homo_sapiens 0 1572
ENST00000436459 EEF1A1P5-001 processed_pseudogene Homo_sapiens 0 1587
ENST00000443590 EEF1A1P12-001 processed_pseudogene Homo_sapiens 0 747
ENST00000445363 AC010240.2-001 processed_pseudogene Homo_sapiens 0 736
ENST00000447052 EEF1A1P1-001 processed_pseudogene Homo_sapiens 0 512
ENST00000449483 RP11-175P19.2-002 processed_transcript Homo_sapiens 0 252
ENST00000450915 EEF1A1P28-001 processed_pseudogene Homo_sapiens 0 1007
ENST00000451469 EEF1A1P24-001 processed_pseudogene Homo_sapiens 0 1354
ENST00000455918 EEF1A1-003 protein_coding Homo_sapiens 0 370
ENST00000458319 EEF1A1P26-001 processed_pseudogene Homo_sapiens 0 671
ENST00000475365 EEF1A1P10-001 processed_pseudogene Homo_sapiens 0 1277
ENST00000488500 EEF1A1-011 retained_intron Homo_sapiens 0 776
ENST00000490569 EEF1A1-008 retained_intron Homo_sapiens 0 1210
ENST00000495333 EEF1A1-002 retained_intron Homo_sapiens 0 621
ENST00000495704 EEF1A1P25-001 processed_pseudogene Homo_sapiens 0 1138
ENST00000503537 EEF1A1P13-001 processed_pseudogene Homo_sapiens 0 1489
ENST00000509116 RP11-553P9.1-001 processed_pseudogene Homo_sapiens 0 1242
ENST00000513637 EEF1A1P19-001 processed_pseudogene Homo_sapiens 0 1447
ENST00000514852 EEF1A1P20-001 processed_pseudogene Homo_sapiens 0 676
ENST00000514975 EEF1A1P9-001 processed_pseudogene Homo_sapiens 0 1489
ENST00000525759 CTD-2063L20.1-001 processed_pseudogene Homo_sapiens 0 446
ENST00000547505 EEF1A1P17-001 processed_pseudogene Homo_sapiens 0 1144
ENST00000554413 EEF1A1P33-001 processed_pseudogene Homo_sapiens 0 713
ENST00000559385 EEF1A1P22-001 processed_pseudogene Homo_sapiens 0 1262
ENST00000567658 EEF1A1P38-001 processed_pseudogene Homo_sapiens 0 1243
ENST00000596811 EEF1A1P7-001 processed_pseudogene Homo_sapiens 0 1195
ENST00000605239 AP000436.4-001 processed_pseudogene Homo_sapiens 0 556
ENST00000610520 EEF1A1-201 protein_coding Homo_sapiens 0 1024
ENST00000615060 EEF1A1-202 protein_coding Homo_sapiens 0 1559

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