C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lon peptidase 2, peroxisomal
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121673 Lonp2-003 ENSMUSG00000047866 10090 + 8:86651569-86716632 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000121673
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000121673 16.167±0.89 13.884±2.05 7.124±0.00 15.107±0.00 4.581±1.10 7.036±0.50 7.454±2.00 11.982±2.45 12.698±0.30 2.263±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VR CIL_0002VR_0002 CGP 8:86624043-86746006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004176 IBA ATP-dependent peptidase activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005782 IBA peroxisomal matrix
GO:0006200 IEA ATP catabolic process
GO:0006515 IBA misfolded or incompletely synthesized protein catabolic process
GO:0006625 IBA protein targeting to peroxisome
GO:0016485 IBA protein processing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285737 LONP2-001 protein_coding Homo_sapiens 0 1563
ENST00000416006 LONP2-004 nonsense_mediated_decay Homo_sapiens 0 808
ENST00000535754 LONP2-003 protein_coding Homo_sapiens 0 1563
ENST00000564259 LONP2-008 processed_transcript Homo_sapiens 0 549
ENST00000565867 LONP2-007 protein_coding Homo_sapiens 0 656
ENST00000566755 LONP2-005 nonsense_mediated_decay Homo_sapiens 0 1563
ENST00000570174 LONP2-006 nonsense_mediated_decay Homo_sapiens 0 385

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