C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12882
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121696 Gm12882-001 ENSMUSG00000081423 10090 - 4:121114789-121115305 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000121696
Transcript ID Testis
ENSMUST00000121696 0.139±0.08

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272317 RPS27A-001 protein_coding Homo_sapiens 0 424
ENST00000329806 RP11-558O12.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000402285 RPS27A-003 protein_coding Homo_sapiens 0 424
ENST00000402798 RP11-367G18.2-001 processed_pseudogene Homo_sapiens 0 366
ENST00000404735 RPS27A-002 protein_coding Homo_sapiens 0 424
ENST00000429552 RP4-814D15.2-001 processed_pseudogene Homo_sapiens 0 351
ENST00000449323 RPS27A-004 protein_coding Homo_sapiens 0 276
ENST00000452665 RP11-423E7.1-001 processed_pseudogene Homo_sapiens 0 237
ENST00000453803 RPS27AP3-001 processed_pseudogene Homo_sapiens 0 298
ENST00000457576 RPS27AP2-001 processed_pseudogene Homo_sapiens 0 379
ENST00000468810 RPS27A-010 retained_intron Homo_sapiens 0.000003 57
ENST00000475545 RPS27AP1-001 processed_pseudogene Homo_sapiens 0 327
ENST00000477681 CTD-2015H6.2-001 processed_pseudogene Homo_sapiens 0 276
ENST00000478196 RPS27A-008 retained_intron Homo_sapiens 0 287
ENST00000492222 RP11-51O6.1-001 transcribed_processed_pseudogene Homo_sapiens 0 440
ENST00000495843 RPS27A-005 retained_intron Homo_sapiens 0 243
ENST00000591758 RP11-51O6.1-002 processed_transcript Homo_sapiens 0 440
ENST00000597285 CTD-3214H19.12-001 processed_pseudogene Homo_sapiens 0 211

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