C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S15, pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121788 Rps15-ps2-001 ENSMUSG00000071419 10090 + 6:58017506-58017943 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121788
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121788 0.333±0.19 3.840±0.77 0.110±0.02 0.053±0.00 0.463±0.20 0.794±0.54 0.622±0.47 0.996±0.35 1.143±1.39 0.357±0.10 0.172±0.00 0.534±0.26 0.281±0.22 0.950±0.22

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000104364 rps15-001 protein_coding Danio_rerio 0 403
ENST00000233609 RPS15-006 protein_coding Homo_sapiens 0 553
ENST00000412567 RP11-389O22.5-001 processed_pseudogene Homo_sapiens 0 442
ENST00000422958 RP5-827C21.1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000433675 AC007969.5-001 processed_pseudogene Homo_sapiens 0 510
ENST00000449885 RPS15P5-001 processed_pseudogene Homo_sapiens 0 473
ENST00000493323 RP11-264F23.1-001 processed_pseudogene Homo_sapiens 0 412
ENST00000522454 CTC-340A15.1-001 processed_pseudogene Homo_sapiens 0 372
ENST00000585665 RPS15-010 protein_coding Homo_sapiens 0 523
ENST00000586096 RPS15-011 protein_coding Homo_sapiens 0 409
ENST00000586686 RPS15-009 protein_coding Homo_sapiens 0 448
ENST00000589656 RPS15-004 protein_coding Homo_sapiens 0 492
ENST00000591032 RPS15-008 protein_coding Homo_sapiens 0 448
ENST00000591804 RPS15-013 protein_coding Homo_sapiens 0 448
ENST00000592588 RPS15-001 protein_coding Homo_sapiens 0 558
ENST00000592623 RPS15-012 protein_coding Homo_sapiens 0 555
ENST00000592700 RPS15-003 retained_intron Homo_sapiens 0 448
ENST00000593052 RPS15-002 protein_coding Homo_sapiens 0 556

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