C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12920
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121818 Gm12920-001 ENSMUSG00000083997 10090 + 4:10813543-10814728 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverENSMUST00000121818
Transcript ID Bladder Liver
ENSMUST00000121818 0.013±0.00 0.005±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000011878 eif4a1b-001 protein_coding Danio_rerio 0 335
ENSDART00000140602 eif4a1b-002 processed_transcript Danio_rerio 0 263
ENST00000293831 EIF4A1-001 protein_coding Homo_sapiens 0 926
ENST00000422633 EIF4A1P2-001 processed_pseudogene Homo_sapiens 0 843
ENST00000428062 EIF4A1P5-001 processed_pseudogene Homo_sapiens 0 752
ENST00000428832 EIF4A1P10-001 processed_pseudogene Homo_sapiens 0 869
ENST00000448133 EIF4A1P6-001 processed_pseudogene Homo_sapiens 0 728
ENST00000577269 EIF4A1-007 protein_coding Homo_sapiens 0 926
ENST00000577738 EIF4A1-016 retained_intron Homo_sapiens 0 316
ENST00000577929 EIF4A1-018 protein_coding Homo_sapiens 0 287
ENST00000578324 EIF4A1-009 retained_intron Homo_sapiens 0 911
ENST00000578476 EIF4A1-014 nonsense_mediated_decay Homo_sapiens 0 374
ENST00000578495 EIF4A1-026 protein_coding Homo_sapiens 0 852
ENST00000579085 EIF4A1-019 retained_intron Homo_sapiens 6e-23 111
ENST00000579139 EIF4A1-013 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000580461 EIF4A1-002 nonsense_mediated_decay Homo_sapiens 0 316
ENST00000580886 EIF4A1-012 retained_intron Homo_sapiens 3e-25 119
ENST00000580888 EIF4A1-038 nonsense_mediated_decay Homo_sapiens 0 571
ENST00000581384 EIF4A1-037 protein_coding Homo_sapiens 0 595
ENST00000581544 EIF4A1-004 nonsense_mediated_decay Homo_sapiens 2e-40 171
ENST00000581770 EIF4A1-015 protein_coding Homo_sapiens 0 215
ENST00000582169 EIF4A1-024 protein_coding Homo_sapiens 0 449
ENST00000582213 EIF4A1-021 retained_intron Homo_sapiens 0 272
ENST00000582746 EIF4A1-008 protein_coding Homo_sapiens 0 926
ENST00000582848 EIF4A1-027 retained_intron Homo_sapiens 0 472
ENST00000583802 EIF4A1-022 protein_coding Homo_sapiens 0 534
ENST00000583899 EIF4A1-020 retained_intron Homo_sapiens 4e-25 119
ENST00000584054 EIF4A1-011 retained_intron Homo_sapiens 9.99995e-41 171
ENST00000584712 EIF4A1-036 retained_intron Homo_sapiens 0 331
ENST00000584784 EIF4A1-028 protein_coding Homo_sapiens 0 630
ENST00000584860 EIF4A1-017 protein_coding Homo_sapiens 0 798
ENST00000584901 EIF4A1-006 retained_intron Homo_sapiens 0 505
ENST00000585024 EIF4A1-025 protein_coding Homo_sapiens 0 549
ENST00000614237 SENP3-EIF4A1-001 nonsense_mediated_decay Homo_sapiens 0 926

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