C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11675
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121873 Gm11675-001 ENSMUSG00000082272 10090 + 11:111276100-111276931 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLiverOvaryPlacentaTestisENSMUST00000121873
Transcript ID Bladder Brain Liver Ovary Placenta Testis
ENSMUST00000121873 0.057±0.00 0.016±0.00 0.031±0.01 0.050±0.00 0.068±0.00 0.066±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072G CIL_00072G_0002 CGP 11:111066164-112787760
CIL_00088A CIL_00088A_0002 VISTA 11:111263100-111864002
CIL_0008WI CIL_0008WI_0002 VISTA 11:111268522-111869439

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000317198 EEF1D-201 protein_coding Homo_sapiens 0 797
ENST00000395119 EEF1D-002 protein_coding Homo_sapiens 0 797
ENST00000419152 EEF1D-202 protein_coding Homo_sapiens 0 797
ENST00000423316 EEF1D-203 protein_coding Homo_sapiens 0 797
ENST00000428783 EEF1DP3-001 processed_transcript Homo_sapiens 0 388
ENST00000431410 EEF1DP5-001 processed_pseudogene Homo_sapiens 0 340
ENST00000433698 EEF1DP2-001 processed_pseudogene Homo_sapiens 0 671
ENST00000442189 EEF1D-001 protein_coding Homo_sapiens 0 797
ENST00000449232 RP11-374C13.1-001 processed_pseudogene Homo_sapiens 4e-18 95
ENST00000464387 ANKRD19P-003 processed_transcript Homo_sapiens 0 671
ENST00000473204 ANKRD19P-004 processed_transcript Homo_sapiens 0 671
ENST00000490410 EEF1DP3-002 retained_intron Homo_sapiens 0 388
ENST00000524397 EEF1D-012 nonsense_mediated_decay Homo_sapiens 0 327
ENST00000524624 EEF1D-053 protein_coding Homo_sapiens 0 625
ENST00000525223 EEF1D-050 protein_coding Homo_sapiens 3e-36 156
ENST00000525695 EEF1D-023 retained_intron Homo_sapiens 0 237
ENST00000526340 EEF1D-039 protein_coding Homo_sapiens 0 235
ENST00000526786 EEF1D-025 retained_intron Homo_sapiens 0 518
ENST00000526838 EEF1D-005 protein_coding Homo_sapiens 0 562
ENST00000527741 EEF1D-008 retained_intron Homo_sapiens 0 562
ENST00000528382 EEF1D-013 protein_coding Homo_sapiens 2e-24 115
ENST00000528610 EEF1D-004 protein_coding Homo_sapiens 0 625
ENST00000529007 EEF1D-009 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000529272 EEF1D-006 protein_coding Homo_sapiens 0 797
ENST00000529516 EEF1D-019 protein_coding Homo_sapiens 0 235
ENST00000529576 EEF1D-015 protein_coding Homo_sapiens 0 351
ENST00000530109 EEF1D-014 protein_coding Homo_sapiens 0 486
ENST00000530191 EEF1D-032 protein_coding Homo_sapiens 0 518
ENST00000530445 EEF1D-017 protein_coding Homo_sapiens 0 425
ENST00000530616 EEF1D-011 protein_coding Homo_sapiens 0 313
ENST00000530848 EEF1D-018 retained_intron Homo_sapiens 0 244
ENST00000531218 EEF1D-046 protein_coding Homo_sapiens 0 510
ENST00000531621 EEF1D-020 protein_coding Homo_sapiens 0 562
ENST00000531931 EEF1D-024 protein_coding Homo_sapiens 3e-36 156
ENST00000532400 EEF1D-016 protein_coding Homo_sapiens 0 244
ENST00000532543 EEF1D-033 protein_coding Homo_sapiens 4e-36 156
ENST00000532741 EEF1D-007 protein_coding Homo_sapiens 0 797
ENST00000533204 EEF1D-047 protein_coding Homo_sapiens 0 518
ENST00000533494 EEF1D-045 protein_coding Homo_sapiens 0 425
ENST00000533749 EEF1D-052 protein_coding Homo_sapiens 0 292
ENST00000533833 EEF1D-010 nonsense_mediated_decay Homo_sapiens 0 390
ENST00000534232 EEF1D-051 retained_intron Homo_sapiens 0 235
ENST00000534377 EEF1D-049 protein_coding Homo_sapiens 3e-36 156
ENST00000534380 EEF1D-048 protein_coding Homo_sapiens 0 689
ENST00000566025 EEF1DP3-003 transcribed_unprocessed_pseudogene Homo_sapiens 0 385
ENST00000614575 EEF1D-205 protein_coding Homo_sapiens 0 625
ENST00000615067 EEF1D-206 protein_coding Homo_sapiens 0 797
ENST00000615698 EEF1D-207 protein_coding Homo_sapiens 0 797
ENST00000618139 EEF1D-204 protein_coding Homo_sapiens 0 704
ENST00000619144 EEF1D-208 protein_coding Homo_sapiens 0 797
ENST00000619198 EEF1D-209 protein_coding Homo_sapiens 0 704
ENST00000620155 EEF1D-210 protein_coding Homo_sapiens 0 797

Loading