C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11424
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121929 Gm11424-001 ENSMUSG00000082726 10090 + 11:82971092-82971920 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainHeartLiverOvaryPlacentaTestisENSMUST00000121929
Transcript ID Adipose Bladder Brain Heart Liver Ovary Placenta Testis
ENSMUST00000121929 0.058±0.00 0.028±0.00 0.028±0.01 0.056±0.00 0.008±0.00 0.139±0.08 0.014±0.00 0.095±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003K4 CIL_0003K4_0002 CGP 11:82951349-82991830

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330479 SETD8-201 protein_coding Homo_sapiens 0 569
ENST00000402868 SETD8-001 protein_coding Homo_sapiens 0 569
ENST00000413684 AC027612.1-001 processed_pseudogene Homo_sapiens 0 529
ENST00000437502 SETD8-005 protein_coding Homo_sapiens 0 569
ENST00000437519 SETD8-002 nonsense_mediated_decay Homo_sapiens 0 569
ENST00000461103 SETD8-003 retained_intron Homo_sapiens 0 562
ENST00000478781 SETD8-007 processed_transcript Homo_sapiens 0 318
ENST00000623146 AL356585.3-201 pseudogene Homo_sapiens 0 529

Loading