C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6285
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122012 Gm6285-001 ENSMUSG00000081703 10090 + X:104947785-104948282 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastLiverOvaryPlacentaENSMUST00000122012
Transcript ID Adipose Bladder Breast Liver Ovary Placenta
ENSMUST00000122012 0.087±0.00 0.117±0.03 0.102±0.00 0.115±0.00 0.185±0.10 0.143±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006OH CIL_0006OH_0002 CGP X:104854952-105117090

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310055 RP11-344H11.4-001 unprocessed_pseudogene Homo_sapiens 0 459
ENST00000361436 RPL12-001 protein_coding Homo_sapiens 0 560
ENST00000374520 RPL12P1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000406185 RP11-480N24.3-001 processed_pseudogene Homo_sapiens 1e-37 158
ENST00000413498 AC005682.7-001 processed_pseudogene Homo_sapiens 0 438
ENST00000424565 RPL12P2-001 processed_pseudogene Homo_sapiens 0 486
ENST00000424633 RPL12L3-001 processed_pseudogene Homo_sapiens 0 527
ENST00000425565 RPL12P29-001 processed_pseudogene Homo_sapiens 0 313
ENST00000428087 RP11-248I9.2-001 processed_pseudogene Homo_sapiens 8e-36 154
ENST00000431098 AC011737.2-001 processed_pseudogene Homo_sapiens 0 549
ENST00000431782 RP11-169K16.6-001 processed_pseudogene Homo_sapiens 0 444
ENST00000432393 AC093698.2-001 processed_pseudogene Homo_sapiens 0 460
ENST00000432629 RPL12P4-001 processed_pseudogene Homo_sapiens 0 558
ENST00000433385 RPL12P15-001 processed_pseudogene Homo_sapiens 0 436
ENST00000439896 RPL12P1-001 processed_pseudogene Homo_sapiens 0 505
ENST00000442319 RPL12P44-001 processed_pseudogene Homo_sapiens 0 324
ENST00000448702 RPL12P1-001 processed_pseudogene Homo_sapiens 0 510
ENST00000452430 RP11-501J20.3-001 processed_pseudogene Homo_sapiens 0 252
ENST00000460355 NBEAL1-003 retained_intron Homo_sapiens 0 549
ENST00000467671 KIFC1-003 processed_transcript Homo_sapiens 0 418
ENST00000471280 RPL12P38-001 transcribed_processed_pseudogene Homo_sapiens 0 508
ENST00000472214 CTB-46B19.1-001 processed_pseudogene Homo_sapiens 0 405
ENST00000477007 RP11-106M3.1-001 processed_pseudogene Homo_sapiens 0 514
ENST00000481802 CTC-250I14.1-001 processed_pseudogene Homo_sapiens 0 477
ENST00000482081 RPL12P8-001 processed_pseudogene Homo_sapiens 0 473
ENST00000483598 RPL12-004 processed_transcript Homo_sapiens 0 209
ENST00000484010 RP11-428G5.2-001 processed_pseudogene Homo_sapiens 0 448
ENST00000485633 RPL12P33-001 processed_pseudogene Homo_sapiens 0 472
ENST00000486695 KIFC1-003 retained_intron Homo_sapiens 0 418
ENST00000486874 RPL12P37-001 processed_pseudogene Homo_sapiens 0 431
ENST00000492999 KIFC1-003 processed_transcript Homo_sapiens 0 412
ENST00000495231 RP11-434O22.1-001 processed_pseudogene Homo_sapiens 0 494
ENST00000497322 RPL12-002 processed_transcript Homo_sapiens 0 438
ENST00000497825 RPL12-003 processed_transcript Homo_sapiens 0 510
ENST00000536368 RPL12-201 protein_coding Homo_sapiens 0 346
ENST00000588627 RPL12P38-002 processed_transcript Homo_sapiens 0 508
ENST00000599500 RPL12P41-001 processed_pseudogene Homo_sapiens 0 394
ENST00000603116 RP4-741O10.1-001 processed_pseudogene Homo_sapiens 4e-32 139

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