C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: predicted gene 11243
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122335 Gm11243-001 ENSMUSG00000081890 10090 + 4:76793729-76794122 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungTestisENSMUST00000122335
Transcript ID Brain Liver Lung Testis
ENSMUST00000122335 0.035±0.00 0.086±0.00 0.164±0.00 0.315±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OT CIL_0003OT_0002 CGP 4:75277354-78211961
CIL_0005UW CIL_0005UW_0003 CGP 4:75941238-80851719

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314138 RPL27A-001 protein_coding Homo_sapiens 0 309
ENST00000424277 RPL27AP8-001 processed_pseudogene Homo_sapiens 0 226
ENST00000469428 RPL27AP5-001 processed_pseudogene Homo_sapiens 0 315
ENST00000492974 RP11-475C16.1-001 processed_pseudogene Homo_sapiens 0 281
ENST00000524496 RPL27A-007 protein_coding Homo_sapiens 0 272
ENST00000526562 RPL27A-009 protein_coding Homo_sapiens 0 263
ENST00000530022 RPL27A-008 protein_coding Homo_sapiens 0 309
ENST00000530913 RPL27A-011 protein_coding Homo_sapiens 0 263
ENST00000531978 RPL27A-004 protein_coding Homo_sapiens 0 233
ENST00000534599 RPL27A-005 nonsense_mediated_decay Homo_sapiens 0 272

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