C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14117
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122417 Gm14117-001 ENSMUSG00000042938 10090 + 2:146305547-146306389 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122417
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122417 0.622±0.22 0.387±0.08 0.451±0.28 0.582±0.07 1.066±0.62 0.741±0.27 1.732±0.26 0.580±0.21 0.533±0.32 0.797±0.42 0.386±0.18 1.381±0.57 0.399±0.17 0.469±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007R6 CIL_0007R6_0002 VISTA 2:146024701-146625932
CIL_0001TW CIL_0001TW_0002 CGP 2:146221921-146512026
CIL_0007A2 CIL_0007A2_0003 CGP 2:146239879-146970097

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329231 ATPAF1-006 protein_coding Homo_sapiens 0 490
ENST00000371937 ATPAF1-201 protein_coding Homo_sapiens 0 1072
ENST00000474020 ATPAF1-003 retained_intron Homo_sapiens 0 488
ENST00000487193 ATPAF1-004 nonsense_mediated_decay Homo_sapiens 0 268
ENST00000492233 ATPAF1-002 protein_coding Homo_sapiens 0 403
ENST00000526821 ATPAF1-007 protein_coding Homo_sapiens 0 424
ENST00000529214 ATPAF1-009 nonsense_mediated_decay Homo_sapiens 0 881
ENST00000532925 ATPAF1-008 protein_coding Homo_sapiens 0 1000
ENST00000534216 ATPAF1-011 protein_coding Homo_sapiens 0 651
ENST00000542495 ATPAF1-202 protein_coding Homo_sapiens 0 881
ENST00000574428 ATPAF1-012 protein_coding Homo_sapiens 0 1072
ENST00000576409 ATPAF1-001 protein_coding Homo_sapiens 0 1072

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