C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 12 (potassium/chloride transporters), member 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122427 Slc12a8-004 ENSMUSG00000035506 10090 + 16:33518278-33663245 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastLiverLungMusclePlacentaENSMUST00000122427
Transcript ID Brain Breast Liver Lung Muscle Placenta
ENSMUST00000122427 0.233±0.00 0.141±0.00 0.074±0.03 0.151±0.00 0.033±0.00 0.144±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UH CIL_0004UH_0002 CGP 16:33380775-33664135
CIL_0004RM CIL_0004RM_0002 CGP 16:33517328-33771576

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016020 IEA membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393469 SLC12A8-001 protein_coding Homo_sapiens 0 1166
ENST00000430155 SLC12A8-003 protein_coding Homo_sapiens 0 241
ENST00000462437 SLC12A8-015 protein_coding Homo_sapiens 0 483
ENST00000465475 SLC12A8-006 processed_transcript Homo_sapiens 0 241
ENST00000469902 SLC12A8-004 protein_coding Homo_sapiens 0 1166
ENST00000473262 SLC12A8-005 nonsense_mediated_decay Homo_sapiens 0 950
ENST00000479352 SLC12A8-002 processed_transcript Homo_sapiens 0 241
ENST00000479826 SLC12A8-014 protein_coding Homo_sapiens 0 313

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