C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-conjugating enzyme E2Q (putative) 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122441 Ube2q2-003 ENSMUSG00000032307 10090 + 9:55150083-55206808 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000122441
Transcript ID Adipose Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000122441 1.341±0.00 3.222±1.72 0.949±0.00 1.382±0.10 1.309±0.14 5.103±0.47 7.555±1.35 8.287±3.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024C CIL_00024C_0002 CGP 9:55148854-55224433

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 ISS ubiquitin-protein transferase activity
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0016881 IEA acid-amino acid ligase activity
GO:0070936 ISS protein K48-linked ubiquitination

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000124645 ube2q2-202 protein_coding Danio_rerio 0 531
ENSDART00000155676 ube2q2-002 protein_coding Danio_rerio 0 470
ENSDART00000155506 ube2q2-001 nonsense_mediated_decay Danio_rerio 0 381
ENST00000267938 UBE2Q2-001 protein_coding Homo_sapiens 0 1892
ENST00000339094 UBE2Q2P1-002 processed_transcript Homo_sapiens 0 366
ENST00000354771 UBE2Q2P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 536
ENST00000413867 UBE2Q2P5Y-001 unprocessed_pseudogene Homo_sapiens 0 255
ENST00000426727 UBE2Q2-004 protein_coding Homo_sapiens 0 819
ENST00000433767 UBE2Q2P4Y-001 unprocessed_pseudogene Homo_sapiens 0 255
ENST00000473125 GOLGA8A-002 retained_intron Homo_sapiens 2e-36 159
ENST00000484716 GOLGA8B-002 retained_intron Homo_sapiens 2e-36 159
ENST00000490086 UBE2Q2P9-001 processed_pseudogene Homo_sapiens 5e-19 97
ENST00000514854 UBE2Q2P10-001 processed_pseudogene Homo_sapiens 0 1037
ENST00000558251 UBE2Q2P1-004 processed_transcript Homo_sapiens 0 366
ENST00000559010 UBE2Q2P1-005 retained_intron Homo_sapiens 2e-16 90
ENST00000559958 UBE2Q2P1-006 processed_transcript Homo_sapiens 1e-21 106
ENST00000561403 UBE2Q2P1-007 processed_transcript Homo_sapiens 0 209
ENST00000561723 UBE2Q2-008 nonsense_mediated_decay Homo_sapiens 4e-39 165
ENST00000561851 UBE2Q2-003 protein_coding Homo_sapiens 0 1598
ENST00000562282 GOLGA8B-011 processed_transcript Homo_sapiens 2e-37 159
ENST00000562635 UBE2Q2-005 processed_transcript Homo_sapiens 4e-34 148
ENST00000563966 UBE2Q2-007 processed_transcript Homo_sapiens 0 582
ENST00000564575 GOLGA8B-006 processed_transcript Homo_sapiens 2e-38 163
ENST00000567921 UBE2Q2-006 nonsense_mediated_decay Homo_sapiens 0 309
ENST00000569100 GOLGA8B-004 retained_intron Homo_sapiens 2e-36 159
ENST00000569423 UBE2Q2-002 protein_coding Homo_sapiens 0 1576
ENST00000613592 UBE2Q2P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 387

Loading