C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | RAE1 RNA export 1 homolog (S. pombe) | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000123039  |
Rae1-004 |
ENSMUSG00000027509 |
10090 | + |
2:173011664-173012821  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008YW | CIL_0008YW_0002 | VISTA | 2:172561962-173164167 |
| CIL_0008TD | CIL_0008TD_0002 | VISTA | 2:172564603-173165839 |
| CIL_0008HJ | CIL_0008HJ_0002 | VISTA | 2:172734798-173336840 |
| CIL_0008BA | CIL_0008BA_0002 | VISTA | 2:172748983-173356071 |
| CIL_0002XR | CIL_0002XR_0002 | CGP | 2:172977700-173015739 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000371242
|
RAE1-002 | protein_coding | Homo_sapiens | 3e-31 | 141 |
|
ENST00000395840
|
RAE1-003 | protein_coding | Homo_sapiens | 4e-31 | 141 |
|
ENST00000395841
|
RAE1-001 | protein_coding | Homo_sapiens | 4e-31 | 141 |
|
ENST00000462438
|
RAE1-004 | retained_intron | Homo_sapiens | 0 | 477 |
|
ENST00000527947
|
RAE1-010 | protein_coding | Homo_sapiens | 2e-31 | 141 |
