C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon (alpha and beta) receptor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123196 Ifnar1-003 ENSMUSG00000022967 10090 + 16:91485249-91507437 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000123196
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000123196 2.802±0.26 1.463±0.28 2.223±0.00 3.781±0.55 1.772±0.41 1.164±0.13 1.802±0.09 1.874±0.48 5.105±0.00 1.053±0.00 5.328±1.74 4.061±0.92 0.674±0.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UY CIL_0007UY_0002 VISTA 16:90990868-91593443
CIL_0007I0 CIL_0007I0_0002 CGP 16:91406164-91507441
CIL_0003WY CIL_0003WY_0002 CGP 16:91485238-91565169

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004904 IMP interferon receptor activity
GO:0005886 TAS plasma membrane
GO:0016021 IEA integral component of membrane
GO:0019221 IMP cytokine-mediated signaling pathway
GO:0032729 IGI positive regulation of interferon-gamma production
GO:0042110 IGI T cell activation
GO:0045351 IMP type I interferon biosynthetic process
GO:0050718 IMP positive regulation of interleukin-1 beta secretion
GO:0051607 IMP defense response to virus

Homologs

No Homologs available.

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