C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | small nuclear RNA activating complex, polypeptide 3 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000123262  |
Snapc3-005 |
ENSMUSG00000028483 |
10090 | + |
4:83417724-83461846  |
nonsense_mediated_decay |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_000147 | CIL_000147_0002 | CGP | 4:83220300-83467676 |
| CIL_0005UX | CIL_0005UX_0003 | CGP | 4:83417724-83486459 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000380733
|
PSIP1-003 | protein_coding | Homo_sapiens | 4e-27 | 128 |
|
ENST00000380738
|
PSIP1-004 | protein_coding | Homo_sapiens | 4e-27 | 128 |
|
ENST00000380799
|
SNAPC3-005 | protein_coding | Homo_sapiens | 0 | 468 |
|
ENST00000380821
|
SNAPC3-002 | protein_coding | Homo_sapiens | 0 | 1210 |
|
ENST00000467062
|
SNAPC3-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 1210 |
|
ENST00000490969
|
SNAPC3-003 | nonsense_mediated_decay | Homo_sapiens | 0 | 1210 |
|
ENST00000610884
|
SNAPC3-201 | protein_coding | Homo_sapiens | 0 | 1210 |
