C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ArfGAP with dual PH domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123748 Adap1-005 ENSMUSG00000056413 10090 - 5:139272930-139274641 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleOvaryENSMUST00000123748
Transcript ID Muscle Ovary
ENSMUST00000123748 0.502±0.00 1.541±0.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008V5 CIL_0008V5_0002 VISTA 5:139236245-139837428
CIL_0008DL CIL_0008DL_0002 VISTA 5:139238772-139840184
CIL_000186 CIL_000186_0002 CGP 5:139252324-139325622
CIL_000185 CIL_000185_0002 CGP 5:139271876-139345233

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265846 ADAP1-001 protein_coding Homo_sapiens 0 514
ENST00000437486 ADAP1-012 protein_coding Homo_sapiens 5e-29 132
ENST00000446141 ADAP1-002 protein_coding Homo_sapiens 0 514
ENST00000449296 ADAP1-201 protein_coding Homo_sapiens 0 514
ENST00000453175 ADAP1-014 protein_coding Homo_sapiens 0 514
ENST00000457254 COX19-002 nonsense_mediated_decay Homo_sapiens 0 514
ENST00000478000 ADAP1-003 retained_intron Homo_sapiens 0 514
ENST00000495809 ADAP1-004 retained_intron Homo_sapiens 0 514
ENST00000539900 ADAP1-202 protein_coding Homo_sapiens 0 514
ENST00000611167 ADAP1-203 protein_coding Homo_sapiens 0 514
ENST00000617043 ADAP1-204 protein_coding Homo_sapiens 0 514

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