C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: src family associated phosphoprotein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123814 Skap1-006 ENSMUSG00000057058 10090 + 11:96708235-96713202 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartLiverOvaryENSMUST00000123814
Transcript ID Heart Liver Ovary
ENSMUST00000123814 0.056±0.00 0.023±0.00 0.712±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ZM CIL_0007ZM_0002 VISTA 11:95992065-96592579
CIL_00097B CIL_00097B_0002 VISTA 11:96441475-97042608

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336915 SKAP1-001 protein_coding Homo_sapiens 0 372
ENST00000579336 SKAP1-005 protein_coding Homo_sapiens 0 628
ENST00000581400 SKAP1-006 nonsense_mediated_decay Homo_sapiens 5e-40 169
ENST00000581419 SKAP1-004 nonsense_mediated_decay Homo_sapiens 0 372
ENST00000584709 SKAP1-003 nonsense_mediated_decay Homo_sapiens 0 372
ENST00000584924 SKAP1-002 protein_coding Homo_sapiens 0 372

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