C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: opticin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124051 Optc-001 ENSMUSG00000010311 10090 - 1:133897199-133907172 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungOvaryTestisENSMUST00000124051
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Ovary Testis
ENSMUST00000124051 1.112±0.10 0.147±0.05 0.790±0.26 0.159±0.07 0.072±0.04 0.132±0.00 0.029±0.00 0.188±0.03 0.703±0.19 0.338±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096T CIL_00096T_0002 VISTA 1:133444227-134045719
CIL_0005VX CIL_0005VX_0002 CGP 1:133699457-133907999

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005578 IEA proteinaceous extracellular matrix
GO:0016525 IMP negative regulation of angiogenesis
GO:0031012 IDA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367222 OPTC-001 protein_coding Homo_sapiens 0 634

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