C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: B cell CLL/lymphoma 11A (zinc finger protein)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124148 Bcl11a-004 ENSMUSG00000000861 10090 + 11:24078147-24090906 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000124148
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000124148 0.049±0.04 0.119±0.02 4.019±0.78 0.530±0.15 0.172±0.00 0.071±0.02 0.035±0.01 1.129±0.93 0.129±0.03 0.069±0.00 0.390±0.00 0.026±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PG CIL_0008PG_0002 VISTA 11:23715166-24317101
CIL_0009DA CIL_0009DA_0002 VISTA 11:23762086-24363576
CIL_0008GM CIL_0008GM_0002 VISTA 11:23795054-24396665
CIL_0008WW CIL_0008WW_0002 VISTA 11:24012332-24614280
CIL_000881 CIL_000881_0002 VISTA 11:24029867-24633908
CIL_0007LM CIL_0007LM_0002 UCNEbase 11:24062983-26981636
CIL_0008BH CIL_0008BH_0002 VISTA 11:24070835-24671855

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000087426 bcl11aa-001 protein_coding Danio_rerio 0 254
ENSDART00000140827 bcl11ab-001 protein_coding Danio_rerio 2e-17 97
ENSDART00000092040 bcl11ab-201 protein_coding Danio_rerio 2e-16 94
ENST00000335712 BCL11A-001 protein_coding Homo_sapiens 0 983
ENST00000356842 BCL11A-002 protein_coding Homo_sapiens 0 983
ENST00000358510 BCL11A-006 protein_coding Homo_sapiens 0 902
ENST00000359629 BCL11A-003 protein_coding Homo_sapiens 0 983
ENST00000409351 BCL11A-004 processed_transcript Homo_sapiens 0 979
ENST00000489183 BCL11A-011 processed_transcript Homo_sapiens 0 355
ENST00000489516 BCL11A-007 processed_transcript Homo_sapiens 0 542

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