C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: opticin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124245 Optc-005 ENSMUSG00000010311 10090 - 1:133897199-133901327 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverMuscleOvaryTestisENSMUST00000124245
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Muscle Ovary Testis
ENSMUST00000124245 1.999±0.61 16.983±0.00 0.061±0.00 0.066±0.01 2.032±0.44 0.076±0.00 0.011±0.01 0.019±0.00 0.761±0.17 0.128±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096T CIL_00096T_0002 VISTA 1:133444227-134045719
CIL_0005VX CIL_0005VX_0002 CGP 1:133699457-133907999

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367222 OPTC-001 protein_coding Homo_sapiens 0 289

Loading