C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: integrin alpha 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124360 Itga9-002 ENSMUSG00000039115 10090 + 9:118711657-118897723 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaTestisENSMUST00000124360
Transcript ID Liver Placenta Testis
ENSMUST00000124360 0.839±0.00 3.128±1.46 0.512±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008L2 CIL_0008L2_0002 VISTA 9:118017970-118619794
CIL_0008CZ CIL_0008CZ_0002 VISTA 9:118558597-119161666
CIL_00099X CIL_00099X_0002 VISTA 9:118563323-119168147
CIL_0005VQ CIL_0005VQ_0002 CGP 9:118606690-119043998

Gene Ontology

GO IDEvidence TypeGO Description
GO:0009925 IDA basal plasma membrane
GO:0030593 IGI neutrophil chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264741 ITGA9-001 protein_coding Homo_sapiens 0 1936
ENST00000411817 ITGA9-004 protein_coding Homo_sapiens 0 481
ENST00000461533 ITGA9-003 retained_intron Homo_sapiens 0 300

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