C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil-helix-coiled-coil-helix domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124436 Chchd3-003 ENSMUSG00000053768 10090 - 6:32792224-33060236 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonKidneyLiverOvaryENSMUST00000124436
Transcript ID Adipose Adrenal Colon Kidney Liver Ovary
ENSMUST00000124436 3.464±0.00 12.191±0.00 12.211±5.90 12.668±2.23 15.339±4.63 4.906±0.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024M CIL_00024M_0003 CGP 6:32144268-33060260
CIL_00024T CIL_00024T_0003 CGP 6:32790976-33973979

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 IDA mitochondrion
GO:0005743 IDA mitochondrial inner membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262570 CHCHD3-001 protein_coding Homo_sapiens 0 544
ENST00000423635 CHCHD3-004 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000425516 CHCHD3P1-001 processed_pseudogene Homo_sapiens 0 289
ENST00000446783 CHCHD3P3-001 processed_pseudogene Homo_sapiens 0 342
ENST00000448878 CHCHD3-003 protein_coding Homo_sapiens 0 505
ENST00000457942 CHCHD3-006 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000466644 CHCHD3-005 retained_intron Homo_sapiens 0 359
ENST00000476546 CHCHD3-002 processed_transcript Homo_sapiens 0 505
ENST00000481152 CHCHD3-008 processed_transcript Homo_sapiens 0 202
ENST00000496427 CHCHD3-007 processed_transcript Homo_sapiens 0 508

Loading