C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chimerin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124450 Chn1-006 ENSMUSG00000056486 10090 - 2:73613084-73716409 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryENSMUST00000124450
Transcript ID Ovary
ENSMUST00000124450 3.753±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HC CIL_0001HC_0002 CGP 2:73563215-73775346
CIL_0001HB CIL_0001HB_0002 CGP 2:73610660-73892639

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295497 CHN1-002 protein_coding Homo_sapiens 0 462
ENST00000409089 CHN1-012 protein_coding Homo_sapiens 0 351
ENST00000409156 CHN1-003 protein_coding Homo_sapiens 0 462
ENST00000409597 CHN1-014 protein_coding Homo_sapiens 0 462
ENST00000409900 CHN1-001 protein_coding Homo_sapiens 0 462
ENST00000413882 CHN1-013 protein_coding Homo_sapiens 0 239
ENST00000443238 CHN1-010 protein_coding Homo_sapiens 0 220
ENST00000444394 CHN1-011 protein_coding Homo_sapiens 0 337
ENST00000451799 CHN1-005 nonsense_mediated_decay Homo_sapiens 0 217
ENST00000469597 CHN1-006 processed_transcript Homo_sapiens 1e-24 117
ENST00000488080 CHN1-004 processed_transcript Homo_sapiens 0 462
ENST00000490654 CHN1-007 retained_intron Homo_sapiens 0 272

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