C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET binding factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124576 Sbf1-002 ENSMUSG00000036529 10090 - 15:89288286-89315271 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000124576
Transcript ID Brain Placenta
ENSMUST00000124576 7.103±0.00 3.453±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00024L CIL_00024L_0002 CGP 15:89253035-89315311
CIL_0000IR CIL_0000IR_0002 CGP 15:89288236-89324728

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001558 TAS regulation of cell growth
GO:0001691 TAS pseudophosphatase activity
GO:0005575 ND cellular_component
GO:0007283 IMP spermatogenesis
GO:0043086 TAS negative regulation of catalytic activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000109452 sbf1-001 protein_coding Danio_rerio 0 944
ENSDART00000091599 sbf1-201 protein_coding Danio_rerio 0 937
ENST00000348911 SBF1-003 protein_coding Homo_sapiens 0 6621
ENST00000380817 SBF1-001 protein_coding Homo_sapiens 0 4399
ENST00000390679 SBF1-201 protein_coding Homo_sapiens 0 6324
ENST00000399627 SBF1-008 retained_intron Homo_sapiens 0 427
ENST00000418590 SBF1-005 protein_coding Homo_sapiens 0 1210
ENST00000438808 RP5-934G17.6-001 processed_pseudogene Homo_sapiens 0 1400
ENST00000444527 SBF1P1-001 processed_pseudogene Homo_sapiens 0 3114
ENST00000470434 SBF1-004 retained_intron Homo_sapiens 0 1903
ENST00000473724 SBF1-006 retained_intron Homo_sapiens 0 344
ENST00000477234 SBF1-009 retained_intron Homo_sapiens 0 359

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