C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: progesterone receptor membrane component 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124636 Pgrmc2-002 ENSMUSG00000049940 10090 - 3:41068520-41070670 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000124636
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000124636 25.229±0.00 36.354±0.00 36.807±3.33 68.990±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YG CIL_0008YG_0002 VISTA 3:40857758-41459600
CIL_0006YL CIL_0006YL_0003 CGP 3:41021939-41083046
CIL_00001N CIL_00001N_0002 CGP 3:41066326-41616862

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296425 PGRMC2-007 protein_coding Homo_sapiens 0 433
ENST00000394276 PGRMC2-002 protein_coding Homo_sapiens 0 440
ENST00000503588 PGRMC2-005 protein_coding Homo_sapiens 0 433
ENST00000503872 PGRMC2-004 protein_coding Homo_sapiens 0 435
ENST00000509070 PGRMC2-006 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000512483 PGRMC2-003 protein_coding Homo_sapiens 0 431
ENST00000520121 PGRMC2-001 protein_coding Homo_sapiens 0 433
ENST00000613358 PGRMC2-201 protein_coding Homo_sapiens 0 433

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