C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tescalcin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124648 Tesc-002 ENSMUSG00000029359 10090 + 5:118027765-118061845 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000124648
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000124648 0.467±0.20 396.383±143.97 6.304±2.92 6.688±2.41 21.380±4.04 9.137±4.92 0.151±0.05 2.495±0.62 0.070±0.00 5.107±3.04 0.604±0.00 0.344±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004YQ CIL_0004YQ_0002 CGP 5:117976770-118061878
CIL_0004YT CIL_0004YT_0002 CGP 5:118027743-118155458

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0006883 ISA cellular sodium ion homeostasis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335209 TESC-001 protein_coding Homo_sapiens 0 865
ENST00000462502 TESC-003 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000470612 TESC-002 nonsense_mediated_decay Homo_sapiens 0 905
ENST00000482176 TESC-005 retained_intron Homo_sapiens 0 383
ENST00000535198 TESC-004 processed_transcript Homo_sapiens 0 372
ENST00000541210 TESC-201 protein_coding Homo_sapiens 0 555
ENST00000549210 TESC-007 protein_coding Homo_sapiens 0 220

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