C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Harvey rat sarcoma virus oncogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124971 Hras-004 ENSMUSG00000025499 10090 - 7:141190930-141193882 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastLungOvaryPlacentaTestisENSMUST00000124971
Transcript ID Adrenal Brain Breast Lung Ovary Placenta Testis
ENSMUST00000124971 6.223±0.14 14.867±0.00 7.779±0.00 10.668±0.00 4.538±0.00 11.807±0.00 2.177±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OR CIL_0003OR_0002 CGP 7:141160328-141194005
CIL_00040A CIL_00040A_0003 CGP 7:141189105-141210055

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS GTPase activity
GO:0005515 IPI protein binding
GO:0005525 IDA GTP binding
GO:0005886 ISO plasma membrane
GO:0006184 IEA GTP catabolic process
GO:0006897 IDA endocytosis
GO:0007264 IDA small GTPase mediated signal transduction
GO:0007265 TAS Ras protein signal transduction
GO:0007569 IDA cell aging
GO:0008283 IPI cell proliferation
GO:0008284 IDA:IGI positive regulation of cell proliferation
GO:0008542 IGI visual learning
GO:0010628 IDA positive regulation of gene expression
GO:0016020 IDA membrane
GO:0030036 IGI actin cytoskeleton organization
GO:0032228 IGI regulation of synaptic transmission, GABAergic
GO:0032403 ISO protein complex binding
GO:0035022 IGI positive regulation of Rac protein signal transduction
GO:0043524 IDA:IGI negative regulation of neuron apoptotic process
GO:0045596 IDA negative regulation of cell differentiation
GO:0046579 ISO positive regulation of Ras protein signal transduction
GO:0048169 IMP:IGI regulation of long-term neuronal synaptic plasticity
GO:0051146 IGI striated muscle cell differentiation
GO:0060441 IDA epithelial tube branching involved in lung morphogenesis
GO:0097193 IGI intrinsic apoptotic signaling pathway

Homologs

No Homologs available.

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