C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000124991 Pabpc4-006 ENSMUSG00000011257 10090 + 4:123294964-123298006 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000124991
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000124991 11.833±0.54 41.242±9.70 14.227±0.42 27.305±4.91 31.873±5.46 53.966±4.38 9.904±2.64 30.202±51.31 8.575±0.31 46.525±12.67 1.478±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000082327 pabpc4-001 protein_coding Danio_rerio 0 206
ENST00000372856 PABPC4-004 protein_coding Homo_sapiens 0 316
ENST00000372857 PABPC4-001 protein_coding Homo_sapiens 0 569
ENST00000372858 PABPC4-002 protein_coding Homo_sapiens 0 881
ENST00000372862 PABPC4-003 protein_coding Homo_sapiens 0 244
ENST00000414338 RP11-393N21.1-001 processed_pseudogene Homo_sapiens 1e-33 147
ENST00000421687 PABPC4-017 protein_coding Homo_sapiens 0 584
ENST00000437136 PABPC4-013 protein_coding Homo_sapiens 0 673
ENST00000461578 PABPC4-014 retained_intron Homo_sapiens 1e-39 165
ENST00000468476 PABPC4-006 retained_intron Homo_sapiens 3e-38 165
ENST00000477556 PABPC4-009 retained_intron Homo_sapiens 0 309
ENST00000483770 PABPC4-016 retained_intron Homo_sapiens 0 316
ENST00000484555 PABPC4-015 retained_intron Homo_sapiens 0 305
ENST00000492468 PABPC4-005 retained_intron Homo_sapiens 2e-38 165
ENST00000525045 PABPC4-023 retained_intron Homo_sapiens 0 244
ENST00000525669 PABPC4-022 retained_intron Homo_sapiens 5.99756e-43 178
ENST00000527718 PABPC4-021 protein_coding Homo_sapiens 0 226
ENST00000549280 RP11-813P10.2-001 processed_pseudogene Homo_sapiens 0 302
ENST00000555663 CTD-2643K12.1-001 processed_pseudogene Homo_sapiens 0 372

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