C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PX domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125037 Pxdc1-003 ENSMUSG00000021411 10090 - 13:34627841-34652681 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastHeartKidneyMuscleOvaryTestisENSMUST00000125037
Transcript ID Adipose Adrenal Breast Heart Kidney Muscle Ovary Testis
ENSMUST00000125037 0.685±0.00 1.741±0.71 4.826±0.00 1.014±0.00 0.703±0.00 0.436±0.00 1.866±0.64 0.411±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003IW CIL_0003IW_0002 CGP 13:34179158-34652681
CIL_0007Y7 CIL_0007Y7_0002 VISTA 13:34527566-35128899
CIL_0003IP CIL_0003IP_0002 CGP 13:34627840-34747613

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380277 PXDC1-003 protein_coding Homo_sapiens 0 449
ENST00000380283 PXDC1-001 protein_coding Homo_sapiens 0 808
ENST00000477592 PXDC1-002 processed_transcript Homo_sapiens 0 822
ENST00000485986 PXDC1-004 processed_transcript Homo_sapiens 0 353

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