C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CAP-GLY domain containing linker protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125340 Clip1-010 ENSMUSG00000049550 10090 - 5:123577818-123603810 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000125340
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000125340 4.554±1.26 8.808±3.02 9.543±0.70 3.709±0.58 3.376±0.00 13.253±0.00 3.374±0.78 1.894±0.75 7.530±1.17 23.411±5.14 3.780±1.29 2.704±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002ZE CIL_0002ZE_0002 CGP 5:123528764-123684618
CIL_0002ZD CIL_0002ZD_0002 CGP 5:123577795-123721044

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000302528 CLIP1-001 protein_coding Homo_sapiens 0 1461
ENST00000358808 CLIP1-201 protein_coding Homo_sapiens 0 1461
ENST00000361654 CLIP1-007 protein_coding Homo_sapiens 0 1461
ENST00000501271 CLIP1-014 retained_intron Homo_sapiens 0 580
ENST00000536634 CLIP1-013 processed_transcript Homo_sapiens 0 826
ENST00000537178 CLIP1-002 protein_coding Homo_sapiens 0 1461
ENST00000538120 CLIP1-010 retained_intron Homo_sapiens 0 833
ENST00000540338 CLIP1-003 protein_coding Homo_sapiens 0 1085
ENST00000540539 CLIP1-015 protein_coding Homo_sapiens 0 531
ENST00000543205 CLIP1-009 retained_intron Homo_sapiens 0 377
ENST00000545889 CLIP1-008 protein_coding Homo_sapiens 0 1461
ENST00000620786 CLIP1-202 protein_coding Homo_sapiens 0 1461

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