C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 20431
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125544 Gm20431-001 ENSMUSG00000089739 10090 - 2:167607850-167661496 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLungPlacentaTestisENSMUST00000125544
Transcript ID Adipose Brain Breast Colon Heart Kidney Lung Placenta Testis
ENSMUST00000125544 27.515±8.87 7.596±0.34 33.663±13.71 28.064±4.76 13.135±1.23 45.383±13.03 22.689±0.00 29.309±0.00 32.330±2.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008I4 CIL_0008I4_0002 VISTA 2:167024358-167627099
CIL_00087E CIL_00087E_0002 VISTA 2:167269881-167871243
CIL_0001TN CIL_0001TN_0002 CGP 2:167538195-167632095
CIL_0007ZW CIL_0007ZW_0002 VISTA 2:167542374-168145654
CIL_0001PF CIL_0001PF_0002 CGP 2:167607638-167661496
CIL_00079R CIL_00079R_0002 CGP 2:167607850-167689822

Gene Ontology

GO IDEvidence TypeGO Description
GO:0008152 IEA metabolic process
GO:0016881 IEA acid-amino acid ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000341698 TMEM189-UBE2V1-001 protein_coding Homo_sapiens 0 1578
ENST00000371650 TMEM189-002 protein_coding Homo_sapiens 0 780
ENST00000371652 TMEM189-001 protein_coding Homo_sapiens 0 832
ENST00000371656 TMEM189-004 protein_coding Homo_sapiens 0 573
ENST00000371658 TMEM189-006 nonsense_mediated_decay Homo_sapiens 0 455
ENST00000453505 TMEM189-003 nonsense_mediated_decay Homo_sapiens 0 726

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