C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, Ca++ transporting, plasma membrane 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125659 Atp2b4-003 ENSMUSG00000026463 10090 - 1:133706311-133753681 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000125659
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000125659 10.422±0.00 1.724±0.71 21.578±0.00 2.045±0.34 7.142±0.97 1.080±0.16 1.253±0.00 0.159±0.00 2.300±0.21 4.824±1.20 0.819±0.51 5.520±0.72

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008W2 CIL_0008W2_0002 VISTA 1:133249313-133850886
CIL_00096T CIL_00096T_0002 VISTA 1:133444227-134045719
CIL_0005VX CIL_0005VX_0002 CGP 1:133699457-133907999

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005388 IEA calcium-transporting ATPase activity
GO:0005524 IEA ATP binding
GO:0005887 TAS integral component of plasma membrane
GO:0006816 TAS calcium ion transport
GO:0008152 IEA metabolic process
GO:0046872 IEA metal ion binding
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263519 ATP2B3-201 protein_coding Homo_sapiens 0 1458
ENST00000341360 ATP2B4-002 protein_coding Homo_sapiens 0 3976
ENST00000349466 ATP2B3-002 protein_coding Homo_sapiens 0 1458
ENST00000352432 ATP2B2-001 protein_coding Homo_sapiens 0 1158
ENST00000357681 ATP2B4-001 protein_coding Homo_sapiens 0 3768
ENST00000359149 ATP2B3-006 protein_coding Homo_sapiens 0 1459
ENST00000360273 ATP2B2-201 protein_coding Homo_sapiens 0 1158
ENST00000367218 ATP2B4-201 protein_coding Homo_sapiens 0 3976
ENST00000370186 ATP2B3-001 protein_coding Homo_sapiens 0 1153
ENST00000383800 ATP2B2-002 protein_coding Homo_sapiens 0 1158
ENST00000393842 ATP2B3-004 protein_coding Homo_sapiens 0 1153
ENST00000397077 ATP2B2-005 protein_coding Homo_sapiens 0 1158
ENST00000452124 ATP2B2-003 protein_coding Homo_sapiens 0 1419
ENST00000460129 ATP2B2-004 nonsense_mediated_decay Homo_sapiens 0 1166
ENST00000460549 ATP2B3-003 processed_transcript Homo_sapiens 0 261

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