C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidase (mitochondrial processing) beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125693 Pmpcb-002 ENSMUSG00000029017 10090 + 5:21737141-21757152 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainLungOvaryENSMUST00000125693
Transcript ID Adipose Bladder Brain Lung Ovary
ENSMUST00000125693 1.717±0.16 1.253±0.05 1.291±0.00 0.979±0.01 2.010±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0002 VISTA 5:21195900-21797355
CIL_0005CJ CIL_0005CJ_0002 CGP 5:21662901-21757152
CIL_0001RL CIL_0001RL_0003 CGP 5:21737141-21785251

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000249269 PMPCB-001 protein_coding Homo_sapiens 0 839
ENST00000428154 PMPCB-007 protein_coding Homo_sapiens 0 778
ENST00000443722 PMPCB-006 nonsense_mediated_decay Homo_sapiens 0 737
ENST00000444457 PMPCB-002 nonsense_mediated_decay Homo_sapiens 0 778
ENST00000453466 PMPCB-004 nonsense_mediated_decay Homo_sapiens 0 839
ENST00000456433 PMPCB-009 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000498530 PMPCB-005 retained_intron Homo_sapiens 0 756

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