C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: isthmin 2 homolog (zebrafish)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125733 Ism2-001 ENSMUSG00000050671 10090 - 12:87278638-87299705 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000125733
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000125733 0.467±0.35 0.063±0.02 0.096±0.03 0.174±0.06 0.249±0.09 0.074±0.03 0.047±0.02 0.017±0.00 0.082±0.05 0.152±0.01 0.024±0.00 0.339±0.16 0.841±0.52 0.077±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004TX CIL_0004TX_0002 CGP 12:87266746-87299705
CIL_00064L CIL_00064L_0003 CGP 12:87278638-87388355

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000123311 ISM2 (2 of 2)-001 protein_coding Danio_rerio 0.0000000000008 81
ENST00000216481 ISM2-002 nonsense_mediated_decay Homo_sapiens 0 723
ENST00000342219 ISM2-001 protein_coding Homo_sapiens 0 723
ENST00000487738 ISM2-007 retained_intron Homo_sapiens 0 459
ENST00000493585 ISM2-003 protein_coding Homo_sapiens 0 649

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