C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tetratricopeptide repeat domain 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125891 Ttc16-002 ENSMUSG00000039021 10090 - 2:32764129-32775633 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000125891
Transcript ID Testis
ENSMUST00000125891 1.912±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YA CIL_0008YA_0002 VISTA 2:32608279-33209524
CIL_00075N CIL_00075N_0002 CGP 2:32757026-32775633

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373289 TTC16-001 protein_coding Homo_sapiens 0 303
ENST00000419060 PTRH1-001 protein_coding Homo_sapiens 4e-31 141
ENST00000429848 PTRH1-006 processed_transcript Homo_sapiens 3e-22 110
ENST00000488285 TTC16-003 retained_intron Homo_sapiens 0 315
ENST00000489226 TTC16-002 retained_intron Homo_sapiens 1.00053e-42 180

Loading