C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: notchless homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126202 Nle1-002 ENSMUSG00000020692 10090 - 11:82904792-82907687 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaENSMUST00000126202
Transcript ID Placenta
ENSMUST00000126202 1.433±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006ES CIL_0006ES_0002 CGP 11:82876434-82900801
CIL_0003B9 CIL_0003B9_0002 CGP 11:82892124-82908411
CIL_0003K1 CIL_0003K1_0002 CGP 11:82900768-82943403

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000360831 NLE1-005 protein_coding Homo_sapiens 0 342
ENST00000442241 NLE1-001 protein_coding Homo_sapiens 0 556
ENST00000586869 NLE1-004 protein_coding Homo_sapiens 0 556
ENST00000588642 NLE1-007 nonsense_mediated_decay Homo_sapiens 0 503
ENST00000589367 NLE1-002 nonsense_mediated_decay Homo_sapiens 0 558
ENST00000593176 NLE1-008 processed_transcript Homo_sapiens 0 220

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