C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spinster homolog 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126810 Spns1-002 ENSMUSG00000030741 10090 - 7:126370067-126377411 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000126810
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000126810 7.499±1.56 10.378±3.47 4.771±0.42 6.349±3.22 10.402±2.37 10.160±1.82 2.654±0.50 7.757±1.74 3.039±0.86 10.084±4.55 1.276±0.16 13.840±6.40 2.761±0.78 1.765±0.40

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AT CIL_0005AT_0002 CGP 7:126370060-126396737

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000311008 SPNS1-001 protein_coding Homo_sapiens 0 1197
ENST00000323081 SPNS1-002 protein_coding Homo_sapiens 0 1197
ENST00000334536 SPNS1-006 protein_coding Homo_sapiens 0 760
ENST00000352260 SPNS1-005 protein_coding Homo_sapiens 0 760
ENST00000489181 IL17RE-004 retained_intron Homo_sapiens 0.000003 58
ENST00000561868 SPNS1-010 processed_transcript Homo_sapiens 0 217
ENST00000564476 SPNS1-012 protein_coding Homo_sapiens 0 460
ENST00000565975 SPNS1-003 protein_coding Homo_sapiens 0 1197
ENST00000566059 SPNS1-007 protein_coding Homo_sapiens 0 795
ENST00000567771 SPNS1-008 protein_coding Homo_sapiens 0 545
ENST00000568388 SPNS1-009 protein_coding Homo_sapiens 0 472
ENST00000568829 SPNS1-011 protein_coding Homo_sapiens 0 531
ENST00000568900 SPNS1-004 retained_intron Homo_sapiens 0 545

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