C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATP-binding cassette, sub-family B (MDR/TAP), member 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126970 Abcb9-002 ENSMUSG00000029408 10090 - 5:124087943-124095786 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastKidneyLiverLungOvaryPlacentaENSMUST00000126970
Transcript ID Adipose Bladder Breast Kidney Liver Lung Ovary Placenta
ENSMUST00000126970 1.408±0.62 0.306±0.04 1.723±0.49 0.750±0.15 1.023±0.64 0.653±0.00 0.287±0.19 0.331±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_00006P CIL_00006P_0003 CGP 5:124004641-124095798
CIL_0002PC CIL_0002PC_0002 CGP 5:124061530-124115483

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280560 ABCB9-004 protein_coding Homo_sapiens 0 636
ENST00000344275 ABCB9-006 protein_coding Homo_sapiens 0 636
ENST00000346530 ABCB9-201 protein_coding Homo_sapiens 0 636
ENST00000392439 ABCB9-002 protein_coding Homo_sapiens 0 636
ENST00000442028 ABCB9-202 protein_coding Homo_sapiens 0 636
ENST00000442833 ABCB9-005 protein_coding Homo_sapiens 0 636
ENST00000537276 ABCB9-008 nonsense_mediated_decay Homo_sapiens 0 636
ENST00000538895 ABCB9-009 retained_intron Homo_sapiens 0 610
ENST00000540285 ABCB9-003 protein_coding Homo_sapiens 0 636
ENST00000542678 ABCB9-001 protein_coding Homo_sapiens 0 636
ENST00000543935 ABCB9-011 protein_coding Homo_sapiens 0 287

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