C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PAX3 and PAX7 binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127002 Paxbp1-007 ENSMUSG00000022974 10090 - 16:91031564-91044354 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryTestisENSMUST00000127002
Transcript ID Ovary Testis
ENSMUST00000127002 24.704±0.00 38.547±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TI CIL_0008TI_0002 VISTA 16:90804484-91407069
CIL_00087M CIL_00087M_0002 VISTA 16:90839145-91442270
CIL_0009BQ CIL_0009BQ_0002 VISTA 16:90840152-91441411
CIL_000089 CIL_000089_0002 CGP 16:90936092-91044543
CIL_0007UY CIL_0007UY_0002 VISTA 16:90990868-91593443
CIL_0003TV CIL_0003TV_0002 CGP 16:91014037-91095122

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000290178 PAXBP1-005 protein_coding Homo_sapiens 0 1712
ENST00000331923 PAXBP1-001 protein_coding Homo_sapiens 0 1712
ENST00000443785 PAXBP1-006 nonsense_mediated_decay Homo_sapiens 0 1712
ENST00000464256 PAXBP1-007 retained_intron Homo_sapiens 0 1393
ENST00000472588 PAXBP1-004 processed_transcript Homo_sapiens 0 1738
ENST00000573680 PAXBP1-005 protein_coding Homo_sapiens 0 614
ENST00000574159 PAXBP1-001 protein_coding Homo_sapiens 0 614
ENST00000575419 PAXBP1-007 retained_intron Homo_sapiens 0 614
ENST00000575821 PAXBP1-004 processed_transcript Homo_sapiens 0 614
ENST00000611190 PAXBP1-006 processed_transcript Homo_sapiens 0 614

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