C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RUN and FYVE domain containing 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127134 Rufy4-002 ENSMUSG00000061815 10090 + 1:74125579-74147773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000127134
Transcript ID Adipose Adrenal Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000127134 0.413±0.34 0.117±0.04 0.140±0.04 0.310±0.21 0.180±0.01 0.321±0.07 0.029±0.02 0.444±0.08 0.039±0.02 0.451±0.18 1.741±0.42 0.177±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WL CIL_0007WL_0002 VISTA 1:73730234-74332407
CIL_0005MB CIL_0005MB_0002 CGP 1:73910231-74148223
CIL_0005VO CIL_0005VO_0002 CGP 1:74125541-74161246

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344321 RUFY4-201 protein_coding Homo_sapiens 0 547
ENST00000374155 RUFY4-002 protein_coding Homo_sapiens 0 547
ENST00000457754 RUFY4-001 nonsense_mediated_decay Homo_sapiens 0 276
ENST00000495721 RUFY4-008 retained_intron Homo_sapiens 0 267

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