C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDKN2A interacting protein N-terminal like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127136 Cdkn2aipnl-002 ENSMUSG00000020392 10090 + 11:51967892-51976244 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENSMUST00000127136
Transcript ID Placenta Testis
ENSMUST00000127136 7.830±0.61 1.790±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0002 VISTA 11:51640537-52246109
CIL_0007JT CIL_0007JT_0003 UCNEbase 11:51813690-51986519

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274516 CDKN2AIPNLP2-001 processed_pseudogene Homo_sapiens 3e-19 99
ENST00000458198 CDKN2AIPNL-001 protein_coding Homo_sapiens 1.99993e-41 174
ENST00000460287 CDKN2AIPNLP1-001 processed_pseudogene Homo_sapiens 2e-34 148

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