C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil and C2 domain containing 2A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127355 Cc2d2a-003 ENSMUSG00000039765 10090 + 5:43696582-43717017 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000127355
Transcript ID Adrenal
ENSMUST00000127355 0.515±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DZ CIL_0003DZ_0003 CGP 5:43515569-43740972
CIL_00026J CIL_00026J_0002 CGP 5:43662379-43821639

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389652 CC2D2A-010 protein_coding Homo_sapiens 0 1554
ENST00000424120 CC2D2A-201 protein_coding Homo_sapiens 0 1554
ENST00000503292 CC2D2A-002 protein_coding Homo_sapiens 0 1554
ENST00000506643 CC2D2A-012 nonsense_mediated_decay Homo_sapiens 0 1317
ENST00000510220 CC2D2A-017 retained_intron Homo_sapiens 1.4013e-45 185
ENST00000512202 CC2D2A-014 retained_intron Homo_sapiens 0 610
ENST00000512702 CC2D2A-003 protein_coding Homo_sapiens 0 303
ENST00000513811 CC2D2A-008 processed_transcript Homo_sapiens 0 595

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