C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lysine (K)-specific demethylase 2B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127403 Kdm2b-007 ENSMUSG00000029475 10090 - 5:122871291-122989794 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007G4 CIL_0007G4_0003 CGP 5:122850188-123015080
CIL_0007G5 CIL_0007G5_0004 CGP 5:122870668-123030450

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000377069 KDM2B-005 protein_coding Homo_sapiens 0 1853
ENST00000377071 KDM2B-001 protein_coding Homo_sapiens 0 1853
ENST00000392464 RNF34-005 protein_coding Homo_sapiens 0 414
ENST00000446152 KDM2B-006 protein_coding Homo_sapiens 0 1456
ENST00000536437 KDM2B-201 protein_coding Homo_sapiens 0 1853
ENST00000538046 KDM2B-004 protein_coding Homo_sapiens 0 606
ENST00000538243 KDM2B-013 retained_intron Homo_sapiens 0 320
ENST00000538379 KDM2B-015 protein_coding Homo_sapiens 0 712
ENST00000538503 KDM2B-020 retained_intron Homo_sapiens 0 1779
ENST00000539394 KDM2B-007 protein_coding Homo_sapiens 0 905
ENST00000540191 KDM2B-008 retained_intron Homo_sapiens 0.0000000000006 79
ENST00000541318 KDM2B-014 protein_coding Homo_sapiens 0 505
ENST00000541511 KDM2B-012 protein_coding Homo_sapiens 0 405
ENST00000542030 KDM2B-017 protein_coding Homo_sapiens 0 436
ENST00000542973 KDM2B-022 protein_coding Homo_sapiens 0 536
ENST00000543025 KDM2B-002 nonsense_mediated_decay Homo_sapiens 0 2588
ENST00000543852 KDM2B-011 protein_coding Homo_sapiens 0 503
ENST00000545022 KDM2B-016 protein_coding Homo_sapiens 0 676
ENST00000611216 KDM2B-202 protein_coding Homo_sapiens 0 2318

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