C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 4 (anion exchanger), member 1, adaptor protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127416 Slc4a1ap-004 ENSMUSG00000029141 10090 + 5:31526997-31534449 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungOvaryTestisENSMUST00000127416
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Ovary Testis
ENSMUST00000127416 3.322±0.00 11.559±2.23 10.053±1.10 6.828±0.70 5.311±0.16 2.955±1.22 8.133±1.65 9.296±1.66 3.115±0.83

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013M CIL_00013M_0002 CGP 5:31494741-31527807
CIL_0003JM CIL_0003JM_0003 CGP 5:31514569-31554042
CIL_00013J CIL_00013J_0002 CGP 5:31526995-31701972

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326019 SLC4A1AP-001 protein_coding Homo_sapiens 0 545
ENST00000427424 SLC4A1AP-003 nonsense_mediated_decay Homo_sapiens 0 442
ENST00000613058 SLC4A1AP-201 protein_coding Homo_sapiens 0 545
ENST00000613517 SLC4A1AP-004 protein_coding Homo_sapiens 0 446
ENST00000618046 SLC4A1AP-005 protein_coding Homo_sapiens 0 545

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