C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: copine VII
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000127431 Cpne7-004 ENSMUSG00000034796 10090 + 8:123128623-123131892 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HA CIL_0008HA_0002 VISTA 8:122617544-123223043
CIL_0006AP CIL_0006AP_0003 CGP 8:123102350-123135182

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263791 EIF2AK4-001 protein_coding Homo_sapiens 0.0004 53
ENST00000268720 CPNE7-002 protein_coding Homo_sapiens 0 281
ENST00000293778 CXCL16-001 protein_coding Homo_sapiens 0.0000002 62
ENST00000319518 CPNE7-001 protein_coding Homo_sapiens 0 281
ENST00000462432 CPSF3L-005 processed_transcript Homo_sapiens 0.000004 58
ENST00000529800 CPNE7-004 protein_coding Homo_sapiens 0 281
ENST00000558557 EIF2AK4-005 retained_intron Homo_sapiens 0.0002 53
ENST00000558629 EIF2AK4-004 retained_intron Homo_sapiens 0.0003 53
ENST00000558823 EIF2AK4-009 protein_coding Homo_sapiens 0.00004 53
ENST00000560855 EIF2AK4-003 protein_coding Homo_sapiens 0.0003 53
ENST00000565109 ADAT1-007 processed_transcript Homo_sapiens 0.00001 55
ENST00000568977 CPNE7-010 nonsense_mediated_decay Homo_sapiens 2.00386e-43 180
ENST00000576153 CXCL16-003 processed_transcript Homo_sapiens 0.0000002 62

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